real_multi_modality #459
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real_multi_modality #459
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… celltype_annotation_automl
… celltype_annotation_automl
for more information, see https://pre-commit.ci
…ML/dance into celltype_annotation_automl
for more information, see https://pre-commit.ci
…ML/dance into celltype_annotation_automl
xingzhongyu
commented
Dec 18, 2024
| @@ -270,6 +274,72 @@ def _load_raw_data(self, ct_col: str = "Cell_type") -> Tuple[ad.AnnData, List[Se | |||
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| return adata, labels, idx_to_label, train_size, 0 | |||
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| def _load_raw_data_single_h5ad(self, | |||
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Get train, valid and test data through a single h5ad
xingzhongyu
commented
Dec 18, 2024
| @@ -793,6 +794,14 @@ def _params_search_space(self) -> Dict[str, Dict[str, Optional[Union[str, float] | |||
| def wandb_sweep_config(self) -> Dict[str, Any]: | |||
| if self.wandb_config is None: | |||
| raise ValueError("wandb config not specified in the raw config.") | |||
| if "run_kwargs" in self.config: | |||
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Get specific run_kwargs to search
… celltype_annotation_automl
xingzhongyu
commented
Dec 18, 2024
| @@ -33,7 +33,7 @@ repos: | |||
| args: [--line-width, "120", --profile, black] | |||
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| - repo: https://github.com/PyCQA/docformatter | |||
| rev: v1.7.5 | |||
| rev: eb1df34 | |||
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for more information, see https://pre-commit.ci
… celltype_annotation_automl
for more information, see https://pre-commit.ci
… celltype_annotation_automl
for more information, see https://pre-commit.ci
for more information, see https://pre-commit.ci
… celltype_annotation_automl
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